p53plot: Plot the position p53 responsive elements on a DNA sequence...
In tomateba/p53retriever: detection and display of p53 putative response elements (REs) on DNA sequences

Plot the position p53 responsive elements on a DNA sequence (the mark is placed at the beginning of the responsive element)

1	p53plot(p53.table, start.at, stop.at)

`p53.table`	A dataframe containing the responsive elements, as the one returned from the p53track function.
`start.at`	A numeric value indicating the start coordinate of the plot
`stop.at`	A numeric value indicating the stop coordinate of the plot

an object of class ggplot

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data(CDKN1A)
hits<-p53track(CDKN1A,seqname="CDKN1A")
p53plot(hits,0,20000)

tomateba/p53retriever documentation built on May 31, 2019, 6:10 p.m.

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