quick.DESeq2: Run DESeq2 LRT or Wald Test
In tpq/miSciTools: Miscellaneous Science Tools for Bioinformatic Analysis
Description
Run DESeq2 LRT or Wald Test for differential expression analysis.
Usage
1
quick.DESeq2(x, y, formula, test = "Wald")
Arguments
x
A data.frame of raw sequence counts.
y
A data.frame of annotations.
formula
The formula used for differential expression analysis.
test
The test to run. Choose between "LRT" and "Wald".
tpq/miSciTools documentation built on Sept. 16, 2019, 4:43 p.m.
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Description
Run DESeq2 LRT or Wald Test for differential expression analysis.
Usage
1 | quick.DESeq2(x, y, formula, test = "Wald")
|
Arguments
x |
A data.frame of raw sequence counts. |
y |
A data.frame of annotations. |
formula |
The formula used for differential expression analysis. |
test |
The test to run. Choose between "LRT" and "Wald". |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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