estimate_pd: Estimate phylogenetic diversity from phyloseq object
In twbattaglia/btools: A suite of R function for all types of microbial diversity analyses
Description
Usage
Arguments
Value
Description
Estimate the Faiths phylogenetic diverstiy from an OTU table and phylogenetic tree
Usage
1
estimate_pd(phylo)
Arguments
phylo
A phyloseq object with an OTU table and phylogenetic tree slot.
Value
A data.frame of phylogenetic diversity metrics.
twbattaglia/btools documentation built on May 3, 2019, 1:51 p.m.
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Description Usage Arguments Value
Description
Estimate the Faiths phylogenetic diverstiy from an OTU table and phylogenetic tree
Usage
1 | estimate_pd(phylo)
|
Arguments
phylo |
A phyloseq object with an OTU table and phylogenetic tree slot. |
Value
A data.frame of phylogenetic diversity metrics.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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