API for varemo/piano
Platform for integrative analysis of omics data
| Global functions | |
|---|---|
| GSAheatmap | Man page Source code |
| GSAsummaryTable | Man page Source code |
| GSCsignificanceBatch | Source code |
| GSCstatBatch | Source code |
| GSCstatGenePerm | Source code |
| GSCstatSamplePerm | Source code |
| calcGeneSetStat | Source code |
| checkLoadArg | Source code |
| consensusHeatmap | Man page Source code |
| consensusScores | Man page Source code |
| diffExp | Man page Source code |
| exploreGSAres | Man page Source code |
| extractFactors | Man page Source code |
| fdrGSEA | Source code |
| geneSetSummary | Man page Source code |
| gsa_input | Man page |
| gsa_results | Man page |
| loadGSC | Man page Source code |
| loadMAdata | Man page Source code |
| networkPlot | Man page Source code |
| networkPlot2 | Man page Source code |
| piano | Man page |
| piano-package | Man page |
| polarPlot | Man page Source code |
| print.ArrayData | Source code |
| print.GSAres | Source code |
| print.GSC | Source code |
| pvalFromDistribution | Source code |
| pvalFromFractionGenePerm | Source code |
| pvalFromFractionSamplePerm | Source code |
| runGSA | Man page Source code |
| runGSAhyper | Man page Source code |
| runQC | Man page Source code |
| writeFilesForKiwi | Man page Source code |
