getRNAMagnetGenes: Extracts receptor-ligand pairs mediating interaction between...
In veltenlab/rnamagnet: Infers physical and signaling interactions from single-cell RNA-seq data

Extracts receptor-ligand pairs mediating interaction between two cell types

1	getRNAMagnetGenes(rnamagnet, pop_l, pop_r, thresh = 0.05)

`rnamagnet`	An object of class `rnamagnet`
`pop_l`	Sending population to consider
`pop_r`	Receiving population to consider
`thresh`	Threshold score for ligand and receptor expression

A data frame conaining the score and the receptor-ligand pair

veltenlab/rnamagnet documentation built on June 24, 2021, 6:19 p.m.

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