GetOrderedClusteringRuns: GetOrderedClusteringRuns

In vertesy/Seurat.utils: Seurat.utils - utility functions for Seurat

GetOrderedClusteringRuns

Description

Get Clustering Runs: metadata column names.

Usage

GetOrderedClusteringRuns(
  obj = combined.obj,
  res = FALSE,
  pat = "*snn_res.*[0,1]\\.[0-9]\\.ordered$"
)

Arguments

obj	Seurat object, Default: combined.obj.
res	Clustering resoluton to use, Default: FALSE.
pat	Pattern to match, Default: 'snn_res.0,1\.0-9\.ordered$'

Examples

## Not run: 
if (interactive()) {
  GetOrderedClusteringRuns()
  GetOrderedClusteringRuns(res = 0.5)
}

## End(Not run)

vertesy/Seurat.utils documentation built on Dec. 4, 2024, 5:20 p.m.