PrctCellExpringGene: Proportion of Cells Expressing Given Genes

In vertesy/Seurat.utils: Seurat.utils - utility functions for Seurat

Proportion of Cells Expressing Given Genes

Description

Calculates the proportion of cells expressing one or more specified genes.

Usage

PrctCellExpringGene(genes, group.by = "all", obj = combined.obj, ...)

Arguments

genes	Character vector of gene names of interest.
group.by	Optional grouping variable for analysis (e.g., cell type). Default: 'all'.
obj	Seurat object to analyze. Default: combined.obj.
...	Additional arguments.

Value

Data frame with genes and their cell expression proportion, optionally grouped.

Source

Adapted from Ryan-Zhu on GitHub.

Examples

## Not run: 
PrctCellExpringGene(genes = c("LTB", "GNLY"), obj = combined.obj)

## End(Not run)

vertesy/Seurat.utils documentation built on Dec. 4, 2024, 5:20 p.m.