Files in vitkl/regNETcmap
Tools to study transcriptional regulation using perturbation screens followed by transcriptomic profiling (incl. CMAP, Perturb-seq)

.Rbuildignore

.gitattributes

.gitignore

DESCRIPTION

LICENSE

NAMESPACE

R/.DS_Store

R/TFtargetsINcmap.R R/findOrthologs.R R/geneName2PerturbAnno.R R/keep1OE.R R/ks.test_expl.R R/loadCMap.R R/measureTrPhe.R R/perturbTable.R R/readCMAP.R R/readCMAPsubset.R R/regFromCMAP.R R/svdCMAP.R R/writeLandMarkOnlyFile.R README.md

Rprofmem.out

anti-TF_shRNA_expl.png

man/TFtargetsINcmap.Rd man/completeCellGeneCombs.Rd man/findOrthologs.Rd man/geneName2PerturbAnno.Rd man/ks.test_expl.Rd man/loadCMap.Rd man/mapIDs.Rd man/measureTrPhe.Rd man/openCellInfo.Rd man/perturbTable.Rd man/plotTFtargetsINcmap.Rd man/readCMAP.Rd man/readCMAPsubset.Rd man/regFromCMAP.Rd man/showLargestRegulons.Rd man/svdCMAP.Rd

regNETcmap.Rproj

vitkl/regNETcmap documentation built on Feb. 18, 2020, 3:43 a.m.

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