plot_similarity_matrix: Plot similarity matrix as a heatmap

In vittoriofortino84/COPS: Clustering algorithms for Omics-driven Patient Stratification

Plot similarity matrix as a heatmap

Description

Order using hierarchical clustering

Usage

plot_similarity_matrix(
  sim_mat,
  method = "average",
  palette = "RdBu",
  limits = c(-1, 1),
  palette_direction = 1,
  title = NULL
)

Arguments

sim_mat	similarity matrix
method	hclust method
palette	color distiller palette
limits	bounds of similarity
palette_direction	set color direction
title	plot title

Value

ggplot object

vittoriofortino84/COPS documentation built on Jan. 28, 2025, 3:16 p.m.