ensRsLoc: use ensembl REST API to acquire SNP location for an rsid,...
In vjcitn/BiocRnaHap: explore RNA-seq based haplotyping using Phaser
Description
Usage
Arguments
Examples
Description
use ensembl REST API to acquire SNP location for an rsid, lifting over as necessary
Usage
1
2
Arguments
rsid
character(1)
ch
a liftOver chain object as imported with rtracklayer
chk38
logical(1) to check that the query was resolved with assembly_name 'GRCh38'
target_genome
character(1) just used for tag on result
Examples
1
ensRsLoc()
vjcitn/BiocRnaHap documentation built on June 17, 2019, 9:31 p.m.
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Description Usage Arguments Examples
Description
use ensembl REST API to acquire SNP location for an rsid, lifting over as necessary
Usage
1 2 |
Arguments
rsid |
character(1) |
ch |
a liftOver chain object as imported with rtracklayer |
chk38 |
logical(1) to check that the query was resolved with assembly_name 'GRCh38' |
target_genome |
character(1) just used for tag on result |
Examples
1 | ensRsLoc()
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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