variant_options: create list of snpids in RNA-defined haplotypes
In vjcitn/BiocRnaHap: explore RNA-seq based haplotyping using Phaser
Description
Usage
Arguments
Value
Examples
Description
create list of snpids in RNA-defined haplotypes
Usage
1
2
variant_options(sym = "ORMDL3", radius = 50000,
rna_hap_tab = NA06986_rnahaps, ...)
Arguments
sym
character(1) gene symbol
radius
numeric(1) interval around gene to include
rna_hap_tab
a data.frame as generated by phaser
...
passed to rnahapsNearGene
Value
a list
Examples
1
vjcitn/BiocRnaHap documentation built on June 17, 2019, 9:31 p.m.
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Description Usage Arguments Value Examples
Description
create list of snpids in RNA-defined haplotypes
Usage
1 2 | variant_options(sym = "ORMDL3", radius = 50000,
rna_hap_tab = NA06986_rnahaps, ...)
|
Arguments
sym |
character(1) gene symbol |
radius |
numeric(1) interval around gene to include |
rna_hap_tab |
a data.frame as generated by phaser |
... |
passed to rnahapsNearGene |
Value
a list
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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