makeBubblePlots: Make bubble plots of a matrix or list of matrices

In wStockhausen/tcsamFunctions: Functions related to the BSAI Tanner crab stock assessment (2015+)

Make bubble plots of a matrix or list of matrices

Description

Function to plot a matrix or list of matrices using a bubble plot.

Usage

makeBubblePlots(
  lst,
  x = "year",
  x.lbl = x,
  y = "size",
  y.lbl = y,
  z = "value",
  z.lbl = z,
  fill = "sex",
  fill.lbl = fill,
  scaleBy = 1,
  normalize = FALSE,
  xlims = NULL,
  ylims = NULL,
  colors = RColorBrewer::brewer.pal(11, "Spectral"),
  alpha = 0.5,
  showPlot = TRUE
)

Arguments

lst	: list or matrix
x	: column name for x axis
x.lbl	: label for x axis
y	: column name for y axis
y.lbl	: label for y axis
z	: column name for bubble sizes
z.lbl	: label for sizes
fill	: column name for bubble fill colours
fill.lbl	: label for fills
scaleBy	: value to scale bubbles by
normalize	: flag (T/F) to normalize sums to 1
xlims	: x-axis limits (or NULL)
ylims	: y-axis limits (or NULL)
colors	: color palette to use (default is RColorBrewer::brewer.pal(11,"Spectral"))
alpha	: transparency level
showPlot	: flag to print plot

wStockhausen/tcsamFunctions documentation built on Jan. 28, 2024, 9:01 a.m.