Man pages for waldronlab/curatedTCGAData
Curated Data from The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects
| ACC | Adrenocortical carcinoma |
| ACC-v2.0.1 | Adrenocortical carcinoma |
| ACC-v2.1.0 | Adrenocortical carcinoma |
| BLCA | Bladder Urothelial Carcinoma |
| BLCA-v2.0.1 | Bladder Urothelial Carcinoma |
| BLCA-v2.1.0 | Bladder Urothelial Carcinoma |
| BRCA | Breast invasive carcinoma |
| BRCA-v2.0.1 | Breast invasive carcinoma |
| BRCA-v2.1.0 | Breast invasive carcinoma |
| CESC | Cervical squamous cell carcinoma and endocervical... |
| CESC-v2.0.1 | Cervical squamous cell carcinoma and endocervical... |
| CESC-v2.1.0 | Cervical squamous cell carcinoma and endocervical... |
| CHOL | Cholangiocarcinoma |
| CHOL-v2.0.1 | Cholangiocarcinoma |
| CHOL-v2.1.0 | Cholangiocarcinoma |
| COAD | Colon adenocarcinoma |
| COAD-v2.0.1 | Colon adenocarcinoma |
| COAD-v2.1.0 | Colon adenocarcinoma |
| curatedTCGAData | Create a MultiAssayExperiment from specific assays and... |
| curatedTCGAData-package | curatedTCGAData-package |
| DLBC | Lymphoid Neoplasm Diffuse Large B-cell Lymphoma |
| DLBC-v2.0.1 | Lymphoid Neoplasm Diffuse Large B-cell Lymphoma |
| DLBC-v2.1.0 | Lymphoid Neoplasm Diffuse Large B-cell Lymphoma |
| ESCA | Esophageal carcinoma |
| ESCA-v2.0.1 | Esophageal carcinoma |
| ESCA-v2.1.0 | Esophageal carcinoma |
| GBM | Glioblastoma multiforme |
| GBM-v2.0.1 | Glioblastoma multiforme |
| GBM-v2.1.0 | Glioblastoma multiforme |
| HNSC | Head and Neck squamous cell carcinoma |
| HNSC-v2.0.1 | Head and Neck squamous cell carcinoma |
| HNSC-v2.1.0 | Head and Neck squamous cell carcinoma |
| KICH | Kidney Chromophobe |
| KICH-v2.0.1 | Kidney Chromophobe |
| KICH-v2.1.0 | Kidney Chromophobe |
| KIRC | Kidney renal clear cell carcinoma |
| KIRC-v2.0.1 | Kidney renal clear cell carcinoma |
| KIRC-v2.1.0 | Kidney renal clear cell carcinoma |
| KIRP | Kidney renal papillary cell carcinoma |
| KIRP-v2.0.1 | Kidney renal papillary cell carcinoma |
| KIRP-v2.1.0 | Kidney renal papillary cell carcinoma |
| LAML | Acute Myeloid Leukemia |
| LAML-v2.0.1 | Acute Myeloid Leukemia |
| LAML-v2.1.0 | Acute Myeloid Leukemia |
| LGG | Brain Lower Grade Glioma |
| LGG-v2.0.1 | Brain Lower Grade Glioma |
| LGG-v2.1.0 | Brain Lower Grade Glioma |
| LIHC | Liver hepatocellular carcinoma |
| LIHC-v2.0.1 | Liver hepatocellular carcinoma |
| LIHC-v2.1.0 | Liver hepatocellular carcinoma |
| LUAD | Lung adenocarcinoma |
| LUAD-v2.0.1 | Lung adenocarcinoma |
| LUAD-v2.1.0 | Lung adenocarcinoma |
| LUSC | Lung squamous cell carcinoma |
| LUSC-v2.0.1 | Lung squamous cell carcinoma |
| LUSC-v2.1.0 | Lung squamous cell carcinoma |
| MESO | Mesothelioma |
| MESO-v2.0.1 | Mesothelioma |
| MESO-v2.1.0 | Mesothelioma |
| OV | Ovarian serous cystadenocarcinoma |
| OV-v2.0.1 | Ovarian serous cystadenocarcinoma |
| OV-v2.1.0 | Ovarian serous cystadenocarcinoma |
| OV-v2.1.1 | Ovarian serous cystadenocarcinoma |
| PAAD | Pancreatic adenocarcinoma |
| PAAD-v2.0.1 | Pancreatic adenocarcinoma |
| PAAD-v2.1.0 | Pancreatic adenocarcinoma |
| PCPG | Pheochromocytoma and Paraganglioma |
| PCPG-v2.0.1 | Pheochromocytoma and Paraganglioma |
| PCPG-v2.1.0 | Pheochromocytoma and Paraganglioma |
| PRAD | Prostate adenocarcinoma |
| PRAD-v2.0.1 | Prostate adenocarcinoma |
| PRAD-v2.1.0 | Prostate adenocarcinoma |
| READ | Rectum adenocarcinoma |
| READ-v2.0.1 | Rectum adenocarcinoma |
| READ-v2.1.0 | Rectum adenocarcinoma |
| SARC | Sarcoma |
| SARC-v2.0.1 | Sarcoma |
| SARC-v2.1.0 | Sarcoma |
| SKCM | Skin Cutaneous Melanoma |
| SKCM-v2.0.1 | Skin Cutaneous Melanoma |
| SKCM-v2.1.0 | Skin Cutaneous Melanoma |
| SKCM-v2.1.1 | Skin Cutaneous Melanoma |
| STAD | Stomach adenocarcinoma |
| STAD-v2.0.1 | Stomach adenocarcinoma |
| STAD-v2.1.0 | Stomach adenocarcinoma |
| TGCT | Testicular Germ Cell Tumors |
| TGCT-v2.0.1 | Testicular Germ Cell Tumors |
| TGCT-v2.1.0 | Testicular Germ Cell Tumors |
| THCA | Thyroid carcinoma |
| THCA-v2.0.1 | Thyroid carcinoma |
| THCA-v2.1.0 | Thyroid carcinoma |
| THYM | Thymoma |
| THYM-v2.0.1 | Thymoma |
| THYM-v2.1.0 | Thymoma |
| UCEC | Uterine Corpus Endometrial Carcinoma |
| UCEC-v2.0.1 | Uterine Corpus Endometrial Carcinoma |
| UCEC-v2.1.0 | Uterine Corpus Endometrial Carcinoma |
| UCS | Uterine Carcinosarcoma |
| UCS-v2.0.1 | Uterine Carcinosarcoma |
| UCS-v2.1.0 | Uterine Carcinosarcoma |
| UVM | Uveal Melanoma |
| UVM-v2.0.1 | Uveal Melanoma |
| UVM-v2.1.0 | Uveal Melanoma |
