tss.rn5: tss.rn5 TSS locations

Description Usage Format Source

Description

A GRanges with all the TSSs for rn5. Primarily used in the assign_peaks() function to report distance of a peak to the nearest TSS. Also used to build the QC plot with distribution of peaks to TSSs.

Usage

1

Format

A GRanges object with the following mcols:

gene_id

The Entrez ID for the TSS

symbol

The gene symbol for the TSS

Source

R packages: TxDb.Rnorvegicus.UCSC.rn5.refGene_3.4.2 and org.Rn.eg.db_3.5.0.


wangk4/chipenrich.data documentation built on June 19, 2020, 12:18 a.m.