cal_weightMatrix: load concept database from gmt, calculate concept weights,...
In wangxlab/uniConSigPreCal: Fast calculation of uniConSig and CSEA
Description
Usage
Arguments
Value
Examples
Description
calculate concept weight between the training gene set and concepts, with/without penalty for over-representing gene
Usage
1
cal_weightMatrix(trList)
Arguments
trList
A vector containing all the training gene ids.
Value
A matrix containing two types of concept weights
Examples
1
2
trList.call<-1:100
concept.info<-cal_weightMatrix(trList.call)
wangxlab/uniConSigPreCal documentation built on May 23, 2019, 9:31 a.m.
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Description Usage Arguments Value Examples
Description
calculate concept weight between the training gene set and concepts, with/without penalty for over-representing gene
Usage
1 | cal_weightMatrix(trList)
|
Arguments
trList |
A vector containing all the training gene ids. |
Value
A matrix containing two types of concept weights
Examples
1 2 | trList.call<-1:100
concept.info<-cal_weightMatrix(trList.call)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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