README.md

In welch16/ChIPUtils: ChIPUtils - A package to perform exploratory analysis of ChIP data and most commonly used QC measures

ChIPUtils

The idea of this package is to have several of the functions used in a exploratory analysis of ChIP-seq and ChIP-exo data all together in one package.

We also included some commonly used quality control measures:

• PCR bottleneck coefficient

• Strand cross-correlation

Installation

To install the package it is better to use:

## install.packages("devtools") ## to install devtools
devtools::install_github("welch16/ChIPUtils",ref = "devel")
## or 
devtools::install_github("welch16/ChIPUtils",ref = "devel",build_vignettes = TRUE) 

welch16/ChIPUtils documentation built on May 4, 2019, 4:18 a.m.