PBC: Calculates the PCR bottleneck coefficient
In welch16/ChIPUtils: ChIPUtils - A package to perform exploratory analysis of ChIP data and most commonly used QC measures
Description
Usage
Arguments
Value
Description
Calculates the PCR bottleneck coefficient defined as:
PBC = [# of positions with exactly 1 read mapped] / [# of positions with 1 or more reads mapped ]
Usage
1
PBC(chipdata)
Arguments
chipdata
chipdata object
Value
Value between 0 and 1 with the PBC
welch16/ChIPUtils documentation built on May 4, 2019, 4:18 a.m.
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Description Usage Arguments Value
Description
Calculates the PCR bottleneck coefficient defined as: PBC = [# of positions with exactly 1 read mapped] / [# of positions with 1 or more reads mapped ]
Usage
1 | PBC(chipdata)
|
Arguments
chipdata |
chipdata object |
Value
Value between 0 and 1 with the PBC
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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