SCC-methods: SCC methods

In welch16/ChIPUtils: ChIPUtils - A package to perform exploratory analysis of ChIP data and most commonly used QC measures

Description

Returns a tibble with 2 columns: shift and its corresponding strand cross correlation as defined in Kharchenko et al. 2008

Usage

SCC(object, shift, verbose)

## S4 method for signature 'ChIPdata,numeric,logical'
SCC(object, shift, verbose = FALSE)

Arguments

object	A ChIPdata object
shift	An non-negative integer vector
verbose	a logical value indicating if messages should appear when calculating the SCC

Value

A tibble with two columns, shift and its respect strand cross correlation

welch16/ChIPUtils documentation built on May 4, 2019, 4:18 a.m.