Man pages for welch16/ChIPUtils
ChIPUtils - A package to perform exploratory analysis of ChIP data and most commonly used QC measures
| ChIPdata | ChIPdata object and constructors |
| createBins | Partitions a genome into bins of a fixed length and counts... |
| hexbinPlot | Creates a quick hexbin plot to check the relationship between... |
| isPET-methods | isPET methods |
| MAPlot | Creates a quick MA plot to check the relationship between two... |
| nreads-methods | nreads methods |
| NSC | Calculates the Normalized Strand Cross-Correlation from the... |
| PBC | Calculates the PCR bottleneck coefficient |
| possibleChrSizes | Returns the chromosome sizes available in the package |
| reads-methods | reads methods |
| RSC | Calculates the Relative Strand Cross-Correlation from the SCC... |
| SCC-methods | SCC methods |
