dataClean: dataClean
In wenbostar/metaX: A flexible and comprehensive software for processing omics data.
dataClean R Documentation
dataClean
Description
dataClean
Usage
dataClean(para, valueID = "value", sd.factor = 3, snr = 1, ...)
Arguments
para
A metaXpara object.
valueID
The name of the column used
sd.factor
The factor used to filter peak based on SD
snr
The threshold to filter peak
...
Other argument
Value
A metaXpara object.
Author(s)
Bo Wen wenbostar@gmail.com
Examples
para <- new("metaXpara")
pfile <- system.file("extdata/MTBLS79.txt",package = "metaX")
sfile <- system.file("extdata/MTBLS79_sampleList.txt",package = "metaX")
rawPeaks(para) <- read.delim(pfile,check.names = FALSE)
sampleListFile(para) <- sfile
para <- reSetPeaksData(para)
p <- dataClean(para)
wenbostar/metaX documentation built on July 4, 2023, 7:50 p.m.
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| dataClean | R Documentation |
dataClean
Description
dataClean
Usage
dataClean(para, valueID = "value", sd.factor = 3, snr = 1, ...)
Arguments
para |
A metaXpara object. |
valueID |
The name of the column used |
sd.factor |
The factor used to filter peak based on SD |
snr |
The threshold to filter peak |
... |
Other argument |
Value
A metaXpara object.
Author(s)
Bo Wen wenbostar@gmail.com
Examples
para <- new("metaXpara")
pfile <- system.file("extdata/MTBLS79.txt",package = "metaX")
sfile <- system.file("extdata/MTBLS79_sampleList.txt",package = "metaX")
rawPeaks(para) <- read.delim(pfile,check.names = FALSE)
sampleListFile(para) <- sfile
para <- reSetPeaksData(para)
p <- dataClean(para)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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