filter_genes: filter for mutually expressed genes
In whtns/numbat: Haplotype-Aware CNV Analysis from scRNA-Seq
filter_genes R Documentation
filter for mutually expressed genes
Description
filter for mutually expressed genes
Usage
filter_genes(count_mat, lambdas_ref, gtf, verbose = FALSE)
Arguments
count_mat
dgCMatrix Gene expression counts
lambdas_ref
named numeric vector A reference expression profile
gtf
dataframe Transcript gtf
Value
vector Genes that are kept after filtering
whtns/numbat documentation built on Nov. 8, 2022, 10:48 a.m.
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| filter_genes | R Documentation |
filter for mutually expressed genes
Description
filter for mutually expressed genes
Usage
filter_genes(count_mat, lambdas_ref, gtf, verbose = FALSE)
Arguments
count_mat |
dgCMatrix Gene expression counts |
lambdas_ref |
named numeric vector A reference expression profile |
gtf |
dataframe Transcript gtf |
Value
vector Genes that are kept after filtering
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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