Man pages for wiscstatman/Rolemodel
Gene-set analysis via MFA

bpMCMC with bipartite graph
bpTableWrapper for MCMC with bipartite graph
estPEstimate p using 'mgsa'
gs2edgeCreate Gene set matrices
I2edgeCreate edge data frame from gene - geneset indicator matrix
ILPPerform an integer linear programming
influenzaExample data set
npcExample data set
optimalRMExtract wholes in the smaller incidence matrix
rmPlotDisplay an image of enriched gene sets by MFA analysis
rmTableOne single call function to run both MAP and MCMC analysis...
RolemodelOne single call function to run both MAP and MCMC analysis...
sequentialRMThe sequential approach
shrinkRMShrink the size of the incidence matrix
subRMTrim the incidence matrix
t2dExample data set
T2D_genelistExample input gene list
wiscstatman/Rolemodel documentation built on May 28, 2017, 4:34 a.m.