dot-calc_clusters_dt: make nice data.table of hierarchical clusters
In wmacnair/psupertime: Psupertime is supervised pseudotime for single cell RNAseq data
Description
Usage
Arguments
Value
Description
make nice data.table of hierarchical clusters
Usage
1
.calc_clusters_dt(hclust_obj, x_data, proj_dt, k = 5)
Arguments
hclust_obj
Result of hclust
x_data
Data used to calculate psuper_obj
proj_dt
Projection of cells onto psupertime
Value
data.table containing clusters of genes, ordered according to correlation with psupertime
wmacnair/psupertime documentation built on July 10, 2020, 8:12 p.m.
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Description Usage Arguments Value
Description
make nice data.table of hierarchical clusters
Usage
1 | .calc_clusters_dt(hclust_obj, x_data, proj_dt, k = 5)
|
Arguments
hclust_obj |
Result of hclust |
x_data |
Data used to calculate psuper_obj |
proj_dt |
Projection of cells onto psupertime |
Value
data.table containing clusters of genes, ordered according to correlation with psupertime
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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