plot_predictions_against_classes: Plots confusion matrix of true labels against predicted...
In wmacnair/psupertime: Psupertime is supervised pseudotime for single cell RNAseq data

Plots confusion matrix of true labels against predicted labels.

plot_predictions_against_classes(
  psuper_obj,
  new_x = NULL,
  new_y = NULL,
  process = FALSE,
  plot_var = "prop_true",
  palette = "BuPu"
)

`psuper_obj`	Psupertime object, output from psupertime
`new_x, new_y`	Optional data to predict with psuper_obj
`plot_var`	Variable to plot: prop_true is proportion of true labels, prop_predict is proportion of predicted labels, N is # of cells
`palette`	RColorBrewer palette to use

ggplot2 object

wmacnair/psupertime documentation built on July 10, 2020, 8:12 p.m.

wmacnair/psupertime index

README.md

Note that we can't provide technical support on individual packages. You should contact the package authors for that.

Description