Files in wmoldham/seahorse
Analyze Seahorse Bioenergetic Data
.Rbuildignore
.Rprofile
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
R/Herd-class.R
R/Seahorse-class.R
R/accessors.R
R/analysis.R
R/analyze.R
R/blanks.R
R/calcs.R
R/data.R
R/format_cells.R
R/init.R
R/outliers.R
R/plot.R
R/report.R
R/seahorse-package.R
R/utils.R
data-raw/data.R
data/harold.rda
data/herd.rda
data/horsea.rda
data/sheldon.rda
data/stages_mst.rda
data/storm.rda
data/wells_24.rda
data/wells_ex.rda
inst/extdata/counts_1.csv
inst/extdata/counts_2.csv
inst/extdata/counts_3.csv
inst/extdata/counts_4.csv
inst/extdata/raw_1.xlsx
inst/extdata/raw_2.xlsx
inst/extdata/raw_3.xlsx
inst/extdata/raw_4.xlsx
inst/template/template.Rmd
man/Herd-class.Rd
man/Seahorse.Rd
man/accessors.Rd
man/analysis.Rd
man/analyze.Rd
man/blanks.Rd
man/examples.Rd
man/findOut.Rd
man/format_cells.Rd
man/helpers.Rd
man/outliers.Rd
man/plot.Rd
man/seahorse-package.Rd
seahorse.Rproj
tests/testthat.R
tests/testthat/_snaps/access.md
tests/testthat/_snaps/analysis.md
tests/testthat/_snaps/blanks.md
tests/testthat/_snaps/init-Sea.md
tests/testthat/_snaps/norm.md
tests/testthat/_snaps/out.md
tests/testthat/_snaps/plot/cells.svg
tests/testthat/_snaps/plot/herd-atp-bar.svg
tests/testthat/_snaps/plot/herd-atp-xy.svg
tests/testthat/_snaps/plot/herd-gst.svg
tests/testthat/_snaps/plot/herd-mst.svg
tests/testthat/_snaps/plot/herd-rates-by-experiment.svg
tests/testthat/_snaps/plot/herd-rates-by-group.svg
tests/testthat/_snaps/plot/herd-summary.svg
tests/testthat/_snaps/plot/levels-by-group.svg
tests/testthat/_snaps/plot/levels-by-well.svg
tests/testthat/_snaps/plot/levels-no-blanks.svg
tests/testthat/_snaps/plot/levels-no-outliers.svg
tests/testthat/_snaps/plot/sea-atp-bar.svg
tests/testthat/_snaps/plot/sea-atp-xy.svg
tests/testthat/_snaps/plot/sea-gst.svg
tests/testthat/_snaps/plot/sea-mst.svg
tests/testthat/_snaps/plot/sea-rates-no-blanks.svg
tests/testthat/_snaps/plot/sea-rates-no-outliers.svg
tests/testthat/_snaps/plot/sea-rates-norm-by-group.svg
tests/testthat/_snaps/plot/sea-rates-norm-by-well.svg
tests/testthat/_snaps/plot/sea-rates-not-norm-by-group.svg
tests/testthat/_snaps/plot/sea-summary.svg
tests/testthat/helper.R
tests/testthat/test-access.R
tests/testthat/test-analysis.R
tests/testthat/test-blanks.R
tests/testthat/test-calcs.R
tests/testthat/test-init-Sea.R
tests/testthat/test-norm.R
tests/testthat/test-out.R
tests/testthat/test-plot.R
todo
vignettes/.gitignore
vignettes/articles/outliers.Rmd
