genmap2recombfreq: genmap2recombfreq
In wolfemd/predCrossVar: Prediction of family genomic variances and covariances

Description Usage Arguments Details Value

Compute the pairwise recombination frequencies between all loci from genetic map positions.

1	genmap2recombfreq(m, nChr)

`m`	vector of centiMorgan-scale genetic positions. names(m) correspond to a SNP_ID. Since m potentially contains all chromosomes, sets recomb. freq. b/t chrom. to 0.5
`nChr`	number of chromosomes

names(m) must be formatted as "chr"_"id" with "chr" being integer. For example: 2_QTL1 for a locus on chr. 2. May be worth computing in an R session using multi-threaded BLAS.

potentially really large matrix of pairwise recombination frequencies between loci

wolfemd/predCrossVar documentation built on Dec. 21, 2020, 10:14 a.m.