Man pages for wolfsonliu/enrich
Gene list enrichment on KEGG pathway, GO term, Transcript Factor Targets and so on.
| deg | A Gene List Data to Test Functions. Data of genes with hgnc... |
| enrichKEGGPathway | KEGG pathway enrichment tests. 'enrichKEGGPathway' will do... |
| enrichKEGGPathwayParent | KEGG pathway enrichment tests The function to do... |
| enrichMSigDB | MSigDB data sets enrichment tests. 'enrichMSigDB' will do the... |
| fetchPathwayInfo | Fetch single pathway information from KEGG website... |
| hypergeometricTestVector | Hypergeomatric Test of Terms and Genes... |
| listKEGGOrganism | List available organisms of KEGG website. 'listKEGGOrganism'... |
| listKEGGPathway | List available pathways of KEGG website. 'listKEGGPathway'... |
| MSigDB | MSigDB data Data of the MSigDB sets, stored in list. using... |
| MSigDBSet-class | MSigDB data set class The Class "MSigDBSet" is used to store... |
| readMSigDBxml | MSigDB XML file processing These functions are used to deal... |
| subsetMSigDB | subset MSigDB data subsetMSigDB is used to subset the MSigDB... |
| viewKEGGPathwayInfo | view pathway information of KEGG website.... |
