API for wolski/pairseqsim
pairwise sequence alignment similarity simple.
| Global functions | |
|---|---|
| AAAlignment-class | Man page |
| AAAlphabet-class | Man page |
| AASequence | Man page |
| AASequence-class | Man page |
| AASequenceList-class | Man page |
| EBLOSUM30 | Man page |
| EBLOSUM35 | Man page |
| EBLOSUM40 | Man page |
| EBLOSUM45 | Man page |
| EBLOSUM50 | Man page |
| EBLOSUM55 | Man page |
| EBLOSUM60 | Man page |
| EBLOSUM62 | Man page |
| EBLOSUM65 | Man page |
| EBLOSUM70 | Man page |
| EBLOSUM75 | Man page |
| EBLOSUM80 | Man page |
| EBLOSUM85 | Man page |
| EBLOSUM90 | Man page |
| EPAM10 | Man page |
| EPAM100 | Man page |
| EPAM110 | Man page |
| EPAM120 | Man page |
| EPAM130 | Man page |
| EPAM140 | Man page |
| EPAM150 | Man page |
| EPAM160 | Man page |
| EPAM170 | Man page |
| EPAM180 | Man page |
| EPAM190 | Man page |
| EPAM20 | Man page |
| EPAM200 | Man page |
| EPAM210 | Man page |
| EPAM220 | Man page |
| EPAM230 | Man page |
| EPAM240 | Man page |
| EPAM250 | Man page |
| EPAM260 | Man page |
| EPAM270 | Man page |
| EPAM280 | Man page |
| EPAM290 | Man page |
| EPAM30 | Man page |
| EPAM300 | Man page |
| EPAM310 | Man page |
| EPAM320 | Man page |
| EPAM330 | Man page |
| EPAM340 | Man page |
| EPAM350 | Man page |
| EPAM360 | Man page |
| EPAM370 | Man page |
| EPAM380 | Man page |
| EPAM390 | Man page |
| EPAM40 | Man page |
| EPAM400 | Man page |
| EPAM410 | Man page |
| EPAM420 | Man page |
| EPAM430 | Man page |
| EPAM440 | Man page |
| EPAM450 | Man page |
| EPAM460 | Man page |
| EPAM470 | Man page |
| EPAM480 | Man page |
| EPAM490 | Man page |
| EPAM50 | Man page |
| EPAM500 | Man page |
| EPAM60 | Man page |
| EPAM70 | Man page |
| EPAM80 | Man page |
| EPAM90 | Man page |
| Submatrix | Man page |
| Submatrix-class | Man page |
| [,AASequenceList-method | Man page |
| [<-,AASequenceList-method | Man page |
| [[<-,AASequenceList-method | Man page |
| frequency,AASequence-method | Man page |
| infogrep | Man page |
| initialize,AASequence-method | Man page |
| levels,AAAlphabet-method | Man page |
| listdist | Man page |
| listdist,list-method | Man page |
| listdist-methods | Man page |
| readFasta | Man page |
| readFasta,AASequence-method | Man page Man page |
| readFasta,AASequenceList-method | Man page Man page |
| readFasta-methods | Man page |
| salign | Man page |
| salign,AASequence,AASequence-method | Man page Man page |
| salign,AASequence,AASequenceList-method | Man page Man page Man page |
| salign,AASequenceList,AASequence-method | Man page Man page Man page |
| salign,AASequenceList,NULL-method | Man page Man page |
| salign-methods | Man page |
| selfalign | Man page |
| selfalign,AASequence,Submatrix-method | Man page Man page |
| seqgrep | Man page |
| sequlist | Man page |
| show,AAAlignment-method | Man page |
| show,AAAlphabet-method | Man page |
| show,AASequence-method | Man page |
| show,AASequenceList-method | Man page |
| show,Submatrix-method | Man page |
| subFromEmboss | Man page |
| subFromEmboss,Submatrix,character-method | Man page |
| summary,AAAlignment-method | Man page |
| testalign | Man page |
| testalign,AASequence,AASequence-method | Man page Man page |
| testalign-methods | Man page |
