Files in wolski/pairseqsim
pairwise sequence alignment similarity simple.
.Rbuildignore
.gitignore
DESCRIPTION
INDEX
R/AAAligment.R
R/AAAlphabet.r
R/AASequence.R
R/AASequenceList.R
R/Submatrix.R
R/listdist.R
R/readFasta.R
R/salign.R
R/selfalign.R
R/testalign.R
R/zzz.R
data/EBLOSUM30.rda
data/EBLOSUM35.rda
data/EBLOSUM40.rda
data/EBLOSUM45.rda
data/EBLOSUM50.rda
data/EBLOSUM55.rda
data/EBLOSUM60.rda
data/EBLOSUM62.rda
data/EBLOSUM65.rda
data/EBLOSUM70.rda
data/EBLOSUM75.rda
data/EBLOSUM80.rda
data/EBLOSUM85.rda
data/EBLOSUM90.rda
data/EPAM10.rda
data/EPAM100.rda
data/EPAM110.rda
data/EPAM120.rda
data/EPAM130.rda
data/EPAM140.rda
data/EPAM150.rda
data/EPAM160.rda
data/EPAM170.rda
data/EPAM180.rda
data/EPAM190.rda
data/EPAM20.rda
data/EPAM200.rda
data/EPAM210.rda
data/EPAM220.rda
data/EPAM230.rda
data/EPAM240.rda
data/EPAM250.rda
data/EPAM260.rda
data/EPAM270.rda
data/EPAM280.rda
data/EPAM290.rda
data/EPAM30.rda
data/EPAM300.rda
data/EPAM310.rda
data/EPAM320.rda
data/EPAM330.rda
data/EPAM340.rda
data/EPAM350.rda
data/EPAM360.rda
data/EPAM370.rda
data/EPAM380.rda
data/EPAM390.rda
data/EPAM40.rda
data/EPAM400.rda
data/EPAM410.rda
data/EPAM420.rda
data/EPAM430.rda
data/EPAM440.rda
data/EPAM450.rda
data/EPAM460.rda
data/EPAM470.rda
data/EPAM480.rda
data/EPAM490.rda
data/EPAM50.rda
data/EPAM500.rda
data/EPAM60.rda
data/EPAM70.rda
data/EPAM80.rda
data/EPAM90.rda
data/sequlist.rda
inst/doc/Rplots.ps
inst/doc/SamplesSession-014.eps
inst/doc/SamplesSession-014.pdf
inst/doc/SamplesSession-PlostClust.eps
inst/doc/SamplesSession-PlostClust.pdf
inst/doc/SamplesSession-PlotAAFreq.eps
inst/doc/SamplesSession-PlotAAFreq.pdf
inst/doc/SamplesSession-PlotResid.eps
inst/doc/SamplesSession-PlotResid.pdf
inst/doc/SamplesSession.Rnw
inst/doc/SamplesSession.aux
inst/doc/SamplesSession.dvi
inst/doc/SamplesSession.log
inst/doc/SamplesSession.pdf
inst/doc/SamplesSession.ps
inst/doc/SamplesSession.tex
inst/doc/_region_.tex
inst/doc/makesweave.sh
inst/test/compar.Rnw
inst/test/ex.fasta
inst/test/test.R
man/AAAlignment-class.Rd
man/AAAlphabet-class.Rd
man/AASequence-class.Rd
man/AASequence.Rd
man/AASequenceList-class.Rd
man/EPAM110.Rd
man/Submatrix-class.Rd
man/listdist-methods.Rd
man/readFasta-methods.Rd
man/salign-methods.Rd
man/sequlist.Rd
man/testalign-methods.Rd
pairseqsim.Rproj
src/align.c
src/basic.c
src/callalign.c
src/score.h
