FoldHit.homoVAR.plot.fn: Display FoldHit

In xhdouglas/HTScapacity: An R package for analyzing assay capacity in HTS studies

Description

a function to plot density of measured value to demonstrate FoldHit under homoscedasticity for two groups excluding NA values

Usage

FoldHit.homoVAR.plot.fn(
  FoldHit,
  color = c("green", "grey", "red", "orange"),
  meanHit = -1,
  meanNeg = 0,
  normCut = 3,
  xlab = "Measured value",
  ylab = "Density",
  main = "",
  lwd = 3,
  length.out = 1000,
  round.point = 2
)

Arguments

FoldHit	a vector of FoldHit values for controls
color	colors mark controls
meanHit	mean of measured values of a maximally detectable hit
meanNeg	mean of measured value of the negative reference
normCut	SSMD value for defining a maximally detectable hit
xlab	the label for the x-axis
ylab	the label for the y-axis
main	the label for the figure title
lwd	width of lines
length.out	number of points for showing density
round.point	number of round points for showing capacity values

Value

no return value

Author(s)

Xiaohua Douglas Zhang 02/2020

Examples

FoldHit = c( -3.29058, -1.29296)
  FoldHit.homoVAR.plot.fn( FoldHit, color=c("green","grey","red", "orange"), xlab="Measured value", ylab="Density", main="" )

xhdouglas/HTScapacity documentation built on Dec. 10, 2020, 8:20 p.m.