PrepareMetaPath: PrepareMetaPath

In xia-lab/MetaboAnalystR: An R Package for Comprehensive Analysis of Metabolomics Data

PrepareMetaPath

Description

PrepareMetaPath

Usage

PrepareMetaPath(
  mSetObj = NA,
  mode = "negative",
  ppm = 30,
  version = "v2",
  pcutoff = 0.05,
  rt.type = "seconds",
  dataName,
  dataName2
)

Arguments

mSetObj	mSetObj
mode	ion mode, can be "positive" or "negative"
ppm	mass error, default is 30
version	mummichog version, can be "v1" or "v2"
pcutoff	p value cut-off, default is 0.05
rt.type	character, retention time type, can be "minutes" or "seconds"
dataName	file name 1 with absolute path
dataName2	file name 2 with absolute path or "null"

Author(s)

Jeff [e-mail] Zhiqiang [e-mail] McGill University, Canada License: GNU GPL (>= 2)

xia-lab/MetaboAnalystR documentation built on April 20, 2024, 8:13 p.m.