PrepareMetaPath: PrepareMetaPath
In xia-lab/MetaboAnalystR: An R Package for Comprehensive Analysis of Metabolomics Data
PrepareMetaPath R Documentation
PrepareMetaPath
Description
PrepareMetaPath
Usage
PrepareMetaPath(
mSetObj = NA,
mode = "negative",
ppm = 30,
version = "v2",
pcutoff = 0.05,
rt.type = "seconds",
dataName,
dataName2
)
Arguments
mSetObj
mSetObj
mode
ion mode, can be "positive" or "negative"
ppm
mass error, default is 30
version
mummichog version, can be "v1" or "v2"
pcutoff
p value cut-off, default is 0.05
rt.type
character, retention time type, can be "minutes" or "seconds"
dataName
file name 1 with absolute path
dataName2
file name 2 with absolute path or "null"
Author(s)
Jeff Xiajeff.xia@mcgill.ca
Zhiqiang Pangzhiqiang.pang@mail.mcgill.ca
McGill University, Canada
License: GNU GPL (>= 2)
xia-lab/MetaboAnalystR documentation built on Dec. 23, 2024, 3:44 p.m.
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| PrepareMetaPath | R Documentation |
PrepareMetaPath
Description
PrepareMetaPath
Usage
PrepareMetaPath(
mSetObj = NA,
mode = "negative",
ppm = 30,
version = "v2",
pcutoff = 0.05,
rt.type = "seconds",
dataName,
dataName2
)
Arguments
mSetObj |
mSetObj |
mode |
ion mode, can be "positive" or "negative" |
ppm |
mass error, default is 30 |
version |
mummichog version, can be "v1" or "v2" |
pcutoff |
p value cut-off, default is 0.05 |
rt.type |
character, retention time type, can be "minutes" or "seconds" |
dataName |
file name 1 with absolute path |
dataName2 |
file name 2 with absolute path or "null" |
Author(s)
Jeff Xiajeff.xia@mcgill.ca Zhiqiang Pangzhiqiang.pang@mail.mcgill.ca McGill University, Canada License: GNU GPL (>= 2)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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