PerformPeakAnnotation: Perform peak annotation
In xia-lab/MetaboAnalystR3.0: An R Package for Comprehensive Analysis of Metabolomics Data
Description
Usage
Arguments
Author(s)
References
View source: R/preproc_utils.R
Description
This function performs peak annotation on
the xset object created using the PerformPeakPicking function.
Usage
1
PerformPeakAnnotation(mSet, annotaParam, ncore = 1)
Arguments
xset
The object created using the PerformPeakPicking function,
containing the peak picked MS data.
annParams
The object created using the SetAnnotationParam function,
containing user's specified or default parameters for downstream
raw MS data pre-processing.
Author(s)
Zhiqiang Pang zhiqiang.pang@mail.mcgill.ca, Jasmine Chong jasmine.chong@mail.mcgill.ca,
Mai Yamamoto yamamoto.mai@mail.mcgill.ca, and Jeff Xia jeff.xia@mcgill.ca
McGill University, Canada
License: GNU GPL (>= 2)
References
Kuhl C, Tautenhahn R, Boettcher C, Larson TR, Neumann S (2012).
"CAMERA: an integrated strategy for compound spectra extraction and annotation of
liquid chromatography/mass spectrometry data sets." Analytical Chemistry, 84, 283-289.
http://pubs.acs.org/doi/abs/10.1021/ac202450g.
xia-lab/MetaboAnalystR3.0 documentation built on May 6, 2020, 11:03 p.m.
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Description Usage Arguments Author(s) References
View source: R/preproc_utils.R
Description
This function performs peak annotation on the xset object created using the PerformPeakPicking function.
Usage
1 | PerformPeakAnnotation(mSet, annotaParam, ncore = 1)
|
Arguments
xset |
The object created using the PerformPeakPicking function, containing the peak picked MS data. |
annParams |
The object created using the SetAnnotationParam function, containing user's specified or default parameters for downstream raw MS data pre-processing. |
Author(s)
Zhiqiang Pang zhiqiang.pang@mail.mcgill.ca, Jasmine Chong jasmine.chong@mail.mcgill.ca, Mai Yamamoto yamamoto.mai@mail.mcgill.ca, and Jeff Xia jeff.xia@mcgill.ca McGill University, Canada License: GNU GPL (>= 2)
References
Kuhl C, Tautenhahn R, Boettcher C, Larson TR, Neumann S (2012). "CAMERA: an integrated strategy for compound spectra extraction and annotation of liquid chromatography/mass spectrometry data sets." Analytical Chemistry, 84, 283-289. http://pubs.acs.org/doi/abs/10.1021/ac202450g.
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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