PerformPeakProfiling: Perform peak profiling This function performs feature...
In xia-lab/MetaboAnalystR3.0: An R Package for Comprehensive Analysis of Metabolomics Data
Description
Usage
Arguments
Author(s)
View source: R/preproc_utils.R
Description
Perform peak profiling
This function performs feature extraction of user's raw MS data using
the rawData object created using the ImportRawMSData function.
Usage
1
PerformPeakProfiling(rawData, Params, plotSettings, ncore)
Arguments
rawData
The object created using the ImportRawMSData function,
containing the raw MS data.
Params
The object created using the SetPeakParam function,
containing user's specified or default parameters for downstream
raw MS data pre-processing.
plotSettings
List, plotting parameters produced by SetPlotParam Function.
Defaut is set to true.
ncore
Numeric, used to define the cores' number for Peak Profiling.
Author(s)
Zhiqiang Pang zhiqiang.pang@mail.mcgill.ca, Jasmine Chong jasmine.chong@mail.mcgill.ca,
Mai Yamamoto yamamoto.mai@mail.mcgill.ca, and Jeff Xia jeff.xia@mcgill.ca
McGill University, Canada
License: GNU GPL (>= 2)
xia-lab/MetaboAnalystR3.0 documentation built on May 6, 2020, 11:03 p.m.
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Description Usage Arguments Author(s)
View source: R/preproc_utils.R
Description
Perform peak profiling This function performs feature extraction of user's raw MS data using the rawData object created using the ImportRawMSData function.
Usage
1 | PerformPeakProfiling(rawData, Params, plotSettings, ncore)
|
Arguments
rawData |
The object created using the ImportRawMSData function, containing the raw MS data. |
Params |
The object created using the SetPeakParam function, containing user's specified or default parameters for downstream raw MS data pre-processing. |
plotSettings |
List, plotting parameters produced by SetPlotParam Function. Defaut is set to true. |
ncore |
Numeric, used to define the cores' number for Peak Profiling. |
Author(s)
Zhiqiang Pang zhiqiang.pang@mail.mcgill.ca, Jasmine Chong jasmine.chong@mail.mcgill.ca, Mai Yamamoto yamamoto.mai@mail.mcgill.ca, and Jeff Xia jeff.xia@mcgill.ca McGill University, Canada License: GNU GPL (>= 2)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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