PlotBoxPlot: Plot a boxplot view of a selected compound

Description Usage Arguments Author(s)

View source: R/biomarker_utils.R

Description

Plots a boxplot of the selected compound's concentration between the groups.

Usage

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PlotBoxPlot(
  mSetObj,
  feat.nm,
  imgName,
  format = "png",
  dpi = 72,
  isOpt,
  isQuery
)

Arguments

mSetObj

Input the name of the created mSetObj (see InitDataObjects)

feat.nm

Input the name of the selected compound.

imgName

Input a name for the plot

format

Select the image format, "png", of "pdf".

dpi

Input the dpi. If the image format is "pdf", users need not define the dpi. For "png" images, the default dpi is 72. It is suggested that for high-resolution images, select a dpi of 300.

Author(s)

Jeff Xia jeff.xia@mcgill.ca McGill University, Canada License: GNU GPL (>= 2)


xia-lab/MetaboAnalystR3.0 documentation built on May 6, 2020, 11:03 p.m.