SetCurrentMsetLib: Set current user selected metset library for search
In xia-lab/MetaboAnalystR3.0: An R Package for Comprehensive Analysis of Metabolomics Data
Description
Usage
Arguments
Author(s)
Description
if enrichment analysis, also prepare lib by
creating a list of metabolite sets
Usage
1
SetCurrentMsetLib(mSetObj=NA, lib.type, excludeNum)
Arguments
mSetObj
Input the name of the created mSetObj (see InitDataObjects)
excludeNum
Users input the mimimum number compounds within selected metabolite sets (metabolitesets < excludeNum)
lib.type
Input user selected name of library, "self", "kegg_pathway",
"smpdb_pathway", "blood", "urine", "csf", "snp", "predicted", "location", and "drug".
Author(s)
Jeff Xia jeff.xia@mcgill.ca
McGill University, Canada
License: GNU GPL (>= 2)
xia-lab/MetaboAnalystR3.0 documentation built on May 6, 2020, 11:03 p.m.
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Description Usage Arguments Author(s)
Description
if enrichment analysis, also prepare lib by creating a list of metabolite sets
Usage
1 | SetCurrentMsetLib(mSetObj=NA, lib.type, excludeNum)
|
Arguments
mSetObj |
Input the name of the created mSetObj (see InitDataObjects) |
excludeNum |
Users input the mimimum number compounds within selected metabolite sets (metabolitesets < excludeNum) |
lib.type |
Input user selected name of library, "self", "kegg_pathway", "smpdb_pathway", "blood", "urine", "csf", "snp", "predicted", "location", and "drug". |
Author(s)
Jeff Xia jeff.xia@mcgill.ca McGill University, Canada License: GNU GPL (>= 2)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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