Description Usage Arguments Author(s)
View source: R/parameters_optimization.R
Analyze DoE Result
1 2 3 4 5 6 7 8 9 10 11 12 | Statistic_doe(
object,
object_mslevel,
isotopeIdentification,
BPPARAM = bpparam(),
mSet_OPT,
subdir = NULL,
plot = F,
iterator,
index.set,
useNoise
)
|
object |
MSnExp object, the trimmed or the original data. |
object_mslevel |
List, the parsed metabolomics scans produced by PeakPicking_prep. |
isotopeIdentification |
Character, IsotopeIdentidication method, usually includes 'IPO' and 'CAMERA'. |
BPPARAM |
MulticoreParam method, used to set the parallel method. Default is bpparam(). |
mSet_OPT |
List, the result produced by 'ExperimentsCluster'. |
subdir |
Logical, weather to creat a sub-directory (if true) or not (if false). |
plot |
Logical, weather to plot the Contours plots of the DoE results. |
iterator |
Numeric, the round number of the DoE. |
index.set |
List, the indexes set (including PPS, CV, RCS, GS and Gaussian Index) produced by ExperiemntCluster. |
useNoise |
Numeric, the noise level removed to evalute the gaussian peak. |
Zhiqiang Pang zhiqiang.pang@mail.mcgill.ca Jeff Xia jeff.xia@mcgill.ca Mcgill University License: GNU GPL (>= 2)
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