API for xihaoli/STAAR
STAAR Procedure for Dynamic Incorporation of Multiple Functional Annotations in Whole-Genome Sequencing Studies
| Global functions | |
|---|---|
| AI_STAAR | Man page Source code |
| Bisection | Source code |
| Bisection_Binary_SPA | Source code |
| CCT | Man page Source code |
| CCT_pval | Source code |
| Indiv_Score_Test | Source code |
| Indiv_Score_Test_Region | Man page Source code |
| Indiv_Score_Test_Region_cond | Man page Source code |
| Indiv_Score_Test_SMMAT | Source code |
| Indiv_Score_Test_SMMAT_sparse | Source code |
| Indiv_Score_Test_SMMAT_sparse_cond | Source code |
| K | Source code |
| K1 | Source code |
| K1_Binary_SPA | Source code |
| K1_Binary_SPA_alt | Source code |
| K2 | Source code |
| K2_Binary_SPA | Source code |
| K2_Binary_SPA_alt | Source code |
| K_Binary_SPA | Source code |
| K_Binary_SPA_alt | Source code |
| NR_Binary_SPA | Source code |
| STAAR | Man page Source code |
| STAAR_B_Binary_SPA | Source code |
| STAAR_B_SPA | Source code |
| STAAR_B_SPA_SMMAT | Source code |
| STAAR_B_SPA_SMMAT_sparse | Source code |
| STAAR_Binary_SPA | Man page Source code |
| STAAR_O | Source code |
| STAAR_O_SMMAT | Source code |
| STAAR_O_SMMAT_sparse | Source code |
| STAAR_O_SMMAT_sparse_cond | Source code |
| STAAR_cond | Man page Source code |
| Saddle | Source code |
| Saddle_Binary_SPA | Source code |
| Saddle_Binary_SPA_Bisection | Source code |
| check_is_na | Source code |
| fit_null_glm | Man page Source code |
| fit_null_glm_Binary_SPA | Man page Source code |
| fit_null_glmmkin | Man page Source code |
| fit_null_glmmkin_Binary_SPA | Man page Source code |
| goldenSectionSearchForSignChange | Source code |
| haveSameSign | Source code |
| matrix_flip | Source code |
| matrix_impute | Source code |
