export2rqtl: A function transform the output from this package to Rqtl
In yanjunzan/GBSA: Genotype imputation and QTL mapping with ultra low coverage sequencing in pedigree
Usage
Arguments
Value
Author(s)
References
Usage
1
export2rqtl(genoFile,phenoFile,matchingNames,output.name)
Arguments
genoFile
Genotype matrix output from this package
phenoFile
A datafram with 3 or more column as ID,sex,family id, phentpye1,...ID names have to match the ID names in genotype file
matchingNames
The genome information from ncbi
output.name
full path and file name for output file
Value
This function output a .csv file with name and path specified by output.name argument
Author(s)
Yanjun Zan, Thibaut Payen
References
Yanjun Zan, Thibaut Payen, Leif Andersson, Paul B. Siegel and <c3><96>rjan Carlborg;Whole-genome QTL mapping in experimental pedigrees from outbred founders utilizing low coverage individual based sequencing 2018
yanjunzan/GBSA documentation built on May 14, 2019, 4:05 a.m.
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Usage Arguments Value Author(s) References
Usage
1 | export2rqtl(genoFile,phenoFile,matchingNames,output.name)
|
Arguments
genoFile |
Genotype matrix output from this package |
phenoFile |
A datafram with 3 or more column as ID,sex,family id, phentpye1,...ID names have to match the ID names in genotype file |
matchingNames |
The genome information from ncbi |
output.name |
full path and file name for output file |
Value
This function output a .csv file with name and path specified by output.name argument
Author(s)
Yanjun Zan, Thibaut Payen
References
Yanjun Zan, Thibaut Payen, Leif Andersson, Paul B. Siegel and <c3><96>rjan Carlborg;Whole-genome QTL mapping in experimental pedigrees from outbred founders utilizing low coverage individual based sequencing 2018
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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