get.info: A function to generate information on how many windows are...
In yanjunzan/TD: This is a R package processing output from TIGER pipeline.

Usage Arguments Value Author(s) References Examples

1	get.info(chroms,chroms.len,bin.size)

`chroms`	a vector of chromsome/contig names
`chroms.len`	a vector of chromsome/contig length
`chroms.len`	a vector of chromsome/contig length

Return a list with

`num.bin`	A vector with number of bins on each contig
`index`	A data.frame with start and end of each contig in a linearised index
`loca`	A vector of mid position of each bin
`loca.chr`	A vector of names for each bin
`chr.loca`	a contanated version of chr-pos, used for providing a informative name for each bin

Yanjun Zan, Thibaut Payen

Yanjun Zan, Thibaut Payen, Leif Andersson, Paul B. Siegel and Örjan Carlborg;Whole-genome QTL mapping in experimental pedigrees from outbred founders utilizing low coverage individual based sequencing 2018

##---- Should be DIRECTLY executable !! ----
##-- ==>  Define data, use random,
##--	or do  help(data=index)  for the standard data sets.
## The function is currently defined as

yanjunzan/TD documentation built on May 18, 2019, 3:40 a.m.