MapClustersCor: Maps query clusters to reference clusters using correlation

In yanwu2014/cellMapper: A simple kNN Classifier for single cell gene expression datasets

Maps query clusters to reference clusters using correlation

Description

Maps query clusters to reference clusters using correlation

Usage

MapClustersCor(query.data, query.clusters, train.data, train.clusters,
  genes.use = NULL, metric = "pearson")

Arguments

query.data	Query gene expression matrix
query.clusters	Factor of query clusters
train.data	Reference gene expression matrix
train.clusters	Factor of reference clusters
genes.use	Genes to use for classification
metric	Metric to use (either pearson or cosine)

Value

List of reference and query cluster means and cluster correlations

yanwu2014/cellMapper documentation built on Aug. 24, 2023, 2:26 a.m.