uhdata.pl: The uniformly-handled probe-level dataset, 10 probes for each...

uhdata.plR Documentation

The uniformly-handled probe-level dataset, 10 probes for each unique probe

Description

A five percent random subset of the uniformly-handled probe-level dataset, 10 probes per each unique probe. The expressions are on a log2 scale without background adjustmnet. This dataset consists of 181 unique probes, of which 6 are negatively biological control probes from Agilent array platform: "NC2_00079215", "NC1_00000215", "NC1_00000197", "NC2_00122731", "NC2_00092197", and "NC2_00106057". The sample IDs (the column names) ending with "E" or "V" are used to indicate whether a sample is endometrial or ovarian tumor sample. There are 96 endometrial and 96 ovarian tumor samples.

Usage

uhdata.pl

Format

A data matrix with 1810 rows (probes) and 192 columns (samples).


yilinwu123/precision1 documentation built on June 28, 2022, 2:53 a.m.