Files in yiluheihei/RevEcoR

Reverse Ecology Analysis on Microbiome

.DS_Store

.Rbuildignore

.gitignore

.travis.yml

DESCRIPTION

NAMESPACE

R/AllClasses.R R/KosarajuSCC.R R/RefDbcache.R R/RevEcoR.R R/anno.species.R R/calculateCooperationIndex.R R/compose.R R/getOrgMetabolicData.R R/getSeedSets.R R/gut_microbiome.R R/kegg_buc.R R/kegg_ptr.R R/reconsructGsMN.R README.md

RevEcoR.Rproj

_pkgdown.yml

data/RefDbcache.rda

data/anno.species.rda

data/gut_microbiome.rda

data/kegg_buc.rda

data/kegg_ptr.rda

docs/articles/RevEcoR.html

docs/articles/RevEcoR_files/figure-html/unnamed-chunk-5-1.png

docs/articles/RevEcoR_files/figure-html/unnamed-chunk-6-1.png

docs/articles/index.html

docs/authors.html

docs/index.html

docs/jquery.sticky-kit.min.js

docs/link.svg

docs/pkgdown.css

docs/pkgdown.js

docs/reference/Interactions.html

docs/reference/KosarajuSCC.html

docs/reference/RefDbcache.html

docs/reference/RevEcoR.html

docs/reference/anno.species.html

docs/reference/calculateCooperationIndex.html

docs/reference/compose.html

docs/reference/confidencescore-methods.html

docs/reference/getGsMN-methods.html

docs/reference/getOrgMetabolicData.html

docs/reference/getSeedSets.html

docs/reference/gut_microbiome.html

docs/reference/index.html

docs/reference/kegg_buc.html

docs/reference/kegg_ptr.html

docs/reference/len-methods.html

docs/reference/nonseed-methods.html

docs/reference/reconstructGsMN.html

docs/reference/seedSize-methods.html

docs/reference/seedset-class.html

docs/reference/show-methods.html

inst/extdata/koanno.tab

inst/extdata/occurrence.tab

man/.DS_Store

man/Interactions.Rd man/KosarajuSCC.Rd man/RefDbcache.Rd man/RevEcoR.Rd man/anno.species.Rd man/calculateCooperationIndex.Rd man/compose.Rd man/confidencescore-methods.Rd man/getGsMN-methods.Rd man/getOrgMetabolicData.Rd man/getSeedSets.Rd man/gut_microbiome.Rd man/kegg_buc.Rd man/kegg_ptr.Rd man/len-methods.Rd man/nonseed-methods.Rd man/reconstructGsMN.Rd man/seedSize-methods.Rd man/seedset-class.Rd man/show-methods.Rd vignettes/RevEcoR.Rmd

yiluheihei/RevEcoR documentation built on July 31, 2019, 9:17 a.m.