ggenrichTree_pre: ggenrichTree_pre function
In ying-ge/ggEnrich: Visualization of gene set enrichment analysis in publication quality
Description
Usage
Arguments
Value
View source: R/ggenrichTree_pre.R
Description
ggenrichTree_pre function is used to draw the similarity of terms in the result of enrichment analysis.
Usage
1
ggenrichTree_pre(inputfile, type, species = "human", ont = "BP")
Arguments
inputfile
the input file,(the ggenrichData function param: type: cluster; format:R_ClusterProfiler or DAVID)
type
the way to get the results of the GO analysis.This param should correspond to the ggenrichData function.(DAVID,ClusterProfiler)
species
default human. (human,mouse)
ont
enrichment analysis parameter.default BP. (BP,CC,MF)
Value
a tree plot.
ying-ge/ggEnrich documentation built on Nov. 24, 2019, 12:34 p.m.
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Description Usage Arguments Value
View source: R/ggenrichTree_pre.R
Description
ggenrichTree_pre function is used to draw the similarity of terms in the result of enrichment analysis.
Usage
1 | ggenrichTree_pre(inputfile, type, species = "human", ont = "BP")
|
Arguments
inputfile |
the input file,(the ggenrichData function param: type: cluster; format:R_ClusterProfiler or DAVID) |
type |
the way to get the results of the GO analysis.This param should correspond to the ggenrichData function.(DAVID,ClusterProfiler) |
species |
default human. (human,mouse) |
ont |
enrichment analysis parameter.default BP. (BP,CC,MF) |
Value
a tree plot.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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