ggenrichplot: ggenrichplot function
In ying-ge/ggEnrich: Visualization of gene set enrichment analysis in publication quality
Description
Usage
Arguments
Value
Description
ggenrichplot function is used to draw the enrichment plot.
Usage
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ggenrichplot(
file,
type,
mycolor = c("red", "navy", "darkgreen", "blueviolet", "chocolate4", "black"),
plot_legend = "right",
selectedGeneID = c("MCM5", "MCM2", "MCM6", "MA7", "PSMD3", "PSMB9")
)
Arguments
file
input file.
type
the type of plot. (dot,line,barcode,clusterprofiler)
mycolor
set color.default ("red","navy","darkgreen","blueviolet","chocolate4","black")
plot_legend
location of the legend. (left,right)
selectedGeneID
choose the gene you care about. default ("MCM5", "MCM2", "MCM6","MA7","PSMD3","PSMB9")
Value
a plot, the format is pdf
ying-ge/ggEnrich documentation built on Nov. 24, 2019, 12:34 p.m.
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Description Usage Arguments Value
Description
ggenrichplot function is used to draw the enrichment plot.
Usage
1 2 3 4 5 6 7 | ggenrichplot(
file,
type,
mycolor = c("red", "navy", "darkgreen", "blueviolet", "chocolate4", "black"),
plot_legend = "right",
selectedGeneID = c("MCM5", "MCM2", "MCM6", "MA7", "PSMD3", "PSMB9")
)
|
Arguments
file |
input file. |
type |
the type of plot. (dot,line,barcode,clusterprofiler) |
mycolor |
set color.default ("red","navy","darkgreen","blueviolet","chocolate4","black") |
plot_legend |
location of the legend. (left,right) |
selectedGeneID |
choose the gene you care about. default ("MCM5", "MCM2", "MCM6","MA7","PSMD3","PSMB9") |
Value
a plot, the format is pdf
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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