pIIterative: pIIterative
In ypriverol/pIR: pIR: Estimating Isoelectric Point (pI) of Peptide and Proteins from Amino Acid Sequence.
Description
Usage
Arguments
Examples
Description
This function compute the isoelectric point of a sequence using the Iterative method
Perez-Riverol et al. Isoelectric point optimization using peptide descriptors and support vector machines. J Proteomics. 2012 Apr 3;75(7):2269-74.
Usage
1
pIIterative(sequence, pkSetMethod = "solomon", gamma = 0.001)
Arguments
sequence
The amino acid sequence to be sue to compute the Isoelectric point
pkSetMethod
The pK set to be used
gamma
The parameter to fix precision
Examples
1
pIIterative(sequence="GLPRKILCAIAKKKGKCKGPLKLVCKC", pkSetMethod = "solomon")
ypriverol/pIR documentation built on May 4, 2019, 5:33 p.m.
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Description Usage Arguments Examples
Description
This function compute the isoelectric point of a sequence using the Iterative method Perez-Riverol et al. Isoelectric point optimization using peptide descriptors and support vector machines. J Proteomics. 2012 Apr 3;75(7):2269-74.
Usage
1 | pIIterative(sequence, pkSetMethod = "solomon", gamma = 0.001)
|
Arguments
sequence |
The amino acid sequence to be sue to compute the Isoelectric point |
pkSetMethod |
The pK set to be used |
gamma |
The parameter to fix precision |
Examples
1 | pIIterative(sequence="GLPRKILCAIAKKKGKCKGPLKLVCKC", pkSetMethod = "solomon")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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