pIIterative: pIIterative

Description Usage Arguments Examples

View source: R/pIIterative.R

Description

This function compute the isoelectric point of a sequence using the Iterative method Perez-Riverol et al. Isoelectric point optimization using peptide descriptors and support vector machines. J Proteomics. 2012 Apr 3;75(7):2269-74.

Usage

1
pIIterative(sequence, pkSetMethod = "solomon", gamma = 0.001)

Arguments

sequence

The amino acid sequence to be sue to compute the Isoelectric point

pkSetMethod

The pK set to be used

gamma

The parameter to fix precision

Examples

1
pIIterative(sequence="GLPRKILCAIAKKKGKCKGPLKLVCKC", pkSetMethod = "solomon")

ypriverol/pIR documentation built on May 4, 2019, 5:33 p.m.