peptides: Isoelectric poit of a set of peptides from a published paper

In ypriverol/pIR: pIR: Estimating Isoelectric Point (pI) of Peptide and Proteins from Amino Acid Sequence.

Description

This dataset contains more than 6000 peptides with the experimental isoelectric point and the predicted pI using different methods. The variables are as follows:

Usage

data(peptides)

Format

A data frame with 1041 rows and 19 variables

Details

• SEQUENCE. The potein accession

• EXPERIMENTAL. The experimental isoelectric point

• COFACTOR. The isoelectric point using the method developed by Cargile and co-workers.

• ITERATIVE_THURLKILL

• ITERATIVE_TOSELAND

• ITERATIVE_GRIMSLEY

• ITERATIVE_SOLOMON

• ITERATIVE_EMBOSS

• ITERATIVE_LEHNINGER

• ITERATIVE_PATRICKIOS

• ITERATIVE_RICHARD

• ITERATIVE_RODWELL

• ITERATIVE_SILLERO

• BRANCA

• BJELL_DEFAULT

• BJELL_SKOOG

• BJELL_CALLIBRATED

• BJELL_EXPASY

• SVM

ypriverol/pIR documentation built on May 4, 2019, 5:33 p.m.