ExtractFile: ExtractFile

In yuanqingyan/singleGEO: Query and Analysis of High-throughput Single Cell Sequencing Data from GEO

ExtractFile

Description

Decompress the files

Usage

ExtractFile(ExtractID = ExtractID, DecompressType = decompressType)

Arguments

ExtractID	The list of GSE IDs. Required
DecompressType	Which types of files to be decompressed if DecompressFile is set to TRUE. Options: "gz"(for .gz),"tar"(for .tar or .tar.gz),"zip"(for .zip) or "All"(for .tar, .tar.gz, .gz, .zip). Optional. Default: "All"

Examples

library(singleGEO)
###not run
##myGeoID<-c("GSE131800")
##DownloadFileInfo<-Get_Geo_Data(DownGSEID=myGeoID,DecompressFile=FALSE)
##ExtractFile(ExtractID=myGeoID,DecompressType="tar")

yuanqingyan/singleGEO documentation built on Jan. 11, 2025, 6:35 p.m.