Get_Geo_Data: Get_Geo_Data

In yuanqingyan/singleGEO: Query and Analysis of High-throughput Single Cell Sequencing Data from GEO

Get_Geo_Data

Description

Download all supplementary data of GSE IDs provided by the user

Usage

Get_Geo_Data(
  DownGSEID = DownGSEID,
  DecompressFile = FALSE,
  DecompressType = "All"
)

Arguments

DownGSEID	The GSE IDs for data downloading. Required
DecompressFile	Whether decompress the files or not. Binary variable with TRUE or FALSE. Optional. Default: FALSE
DecompressType	Which types of files to be decompressed if DecompressFile is set to TRUE. Options: "gz"(for .gz),"tar"(for .tar or .tar.gz),"zip"(for .zip) or "All"(for .tar, .tar.gz, .gz, .zip). Optional. Default: "All"

Value

The list of files downloaded

Examples

library(singleGEO)
###not run
##myGeoID<-c("GSE131800")
##DownloadFileInfo<-Get_Geo_Data(DownGSEID=myGeoID,DecompressFile=FALSE)

yuanqingyan/singleGEO documentation built on Jan. 11, 2025, 6:35 p.m.