Files in yuanwxu/TransPhyloC
Inference of Transmission Tree under a Within-Host Evolution Model
DESCRIPTION
NAMESPACE
R/RcppExports.R
R/computeHost.R
R/computeMatWIW.R
R/consTTree.R
R/extractPTree.R
R/extractTTree.R
R/glueTrees.R
R/inferTTree.R
R/makeCTreeFromPTree.R
R/makeTTree.R
R/phyloFromPtree.R
R/plotCTree.R
R/plotTTree.R
R/plotTTree2.R
R/probPTreeGivenTTree.R
R/proposal.R
R/ptreeFromPhylo.R
R/simulateOutbreak.R
R/withinhost.R
man/TransPhylo-package.Rd
man/computeMatWIW.Rd
man/consTTree.Rd
man/extractPTree.Rd
man/extractTTree.Rd
man/inferTTree.Rd
man/makeCtreeFromPTree.Rd
man/makeTTree.Rd
man/phyloFromPTree.Rd
man/plotCTree.Rd
man/plotTTree.Rd
man/plotTTree2.Rd
man/probPTreeGivenTTree.Rd
man/probTTree.Rd
man/ptreeFromPhylo.Rd
man/simulateOutbreak.Rd
src/RcppExports.cpp
src/probTTree.cpp
