getcluster: Get Pseudo-Spectrum as peaks cluster based on pmd analysis.

In yufree/pmd: Paired Mass Distance Analysis for GC/LC-MS Based Non-Targeted Analysis and Reactomics Analysis

Get Pseudo-Spectrum as peaks cluster based on pmd analysis.

Description

Get Pseudo-Spectrum as peaks cluster based on pmd analysis.

Usage

getcluster(list, corcutoff = NULL, accuracy = 4)

Arguments

list	a list from getstd function
corcutoff	cutoff of the correlation coefficient, default NULL
accuracy	measured mass or mass to charge ratio in digits, default 4

Value

list with Pseudo-Spectrum index

See Also

getpaired,getstd,plotstd

Examples

data(spmeinvivo)
re <- getpaired(spmeinvivo)
re <- getstd(re)
cluster <- getcluster(re)

yufree/pmd documentation built on April 19, 2024, 9:31 a.m.